Accumulation of phenolic compounds and expression of phenylpropanoid biosynthesis-related genes in leaves of basil transformed with A. rhizogenes strains

dc.contributor.authorKısa, Dursun
dc.contributor.authorCeylan, Yusuf
dc.contributor.authorİmamoğlu, Rizvan
dc.contributor.authorCeylan, Yusuf
dc.contributor.authorİmamoğlu, Rizvan
dc.contributor.authorKısa, Dursun
dc.date.accessioned2025-10-18T13:25:04Z
dc.date.created2023
dc.date.issued2023
dc.departmentFakülteler, Fen Fakültesi, Moleküler Biyoloji ve Genetik Bölümü
dc.description.abstractBiotic factors affect the content of secondary metabolites by interfering with molecular and biochemical pathways. In the current study, A. rhizogenes strains were inoculated into basil (Ocimum basilicum) to examine the effect of plant-microbe interaction on the accumulation of monomeric phenolic metabolites and the transcript levels of selected genes involved in the biochemical synthesis of secondary compounds. Initially, the integration of the rolB gene was validated by performing PCR analysis on genomic DNA samples from the basil plant inoculated with A. rhizogenes strains. We have detected that the accumulation of mRNA transcripts linked to the biosynthesis pathway of phenolic compounds has higher transcript expression levels in the leaves of transformed basil in proportion to uninoculated plants. Basil plants inoculated with A. rhizogenes 39207 strain had higher transcript levels of CAD, C4H, TAT, FLS, EGS, HPPR, PAL, and RAS genes than other experimental groups. We have identified eleven phenolic components, and the level of rosmarinic acid, eugenol, chicoric acid, and rutin increased in the inoculated basil leaves. However, the inoculation of A. rhizogenes did not cause a change in the compounds of chlorogenic acid, methyl chavicol, cinnamic acid, quercetin, vanillic acid, and caffeic acid. In conclusion, the increase in basic secondary metabolites could be achieved by the A. rhizogenes-mediated transformation of basil plants, and especially ATCC 43057 strain may be one of the A. rhizogenes strains.
dc.description.sponsorshipTUBITAK (The Scientific and Technological Research Council of Turkey) [120Z668]; Bartin University Scientific Research Projects Coordination Unit [2020-FEN-A-016]
dc.description.sponsorshipAcknowledgementsThe present work has been supported by TUBITAK (The Scientific and Technological Research Council of Turkey) with a research Grand ID: 120Z668 and Bartin University Scientific Research Projects Coordination Unit under Grant number 2020-FEN-A-016.
dc.identifier.doi10.1007/s12298-023-01320-w
dc.identifier.endpage640
dc.identifier.issn0971-5894
dc.identifier.issn0974-0430
dc.identifier.issue5
dc.identifier.orcidCEYLAN, Yusuf/0000-0001-8186-7252
dc.identifier.orcidKISA, Dursun/0000-0002-7681-2385
dc.identifier.orcidIMAMOGLU, RIZVAN/0000-0002-6306-4760
dc.identifier.pmid37363423
dc.identifier.scopus2-s2.0-85161443329
dc.identifier.scopusqualityQ1
dc.identifier.startpage629
dc.identifier.urihttps://doi.org/10.1007/s12298-023-01320-w
dc.identifier.urihttps://hdl.handle.net/11772/23268
dc.identifier.volume29
dc.identifier.wosWOS:001002845900001
dc.identifier.wosqualityQ1
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofPhysiology and Molecular Biology of Plants
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.snmzWoS_20251016
dc.subjectAgrobacterium Rhizogenes
dc.subjectBasil
dc.subjectGene Expression
dc.subjectPhenolic Compound
dc.subjectPlant-Microbe Interaction
dc.titleAccumulation of phenolic compounds and expression of phenylpropanoid biosynthesis-related genes in leaves of basil transformed with A. rhizogenes strains
dc.typeArticle
dspace.entity.typePublication
relation.isAuthorOfPublication011c5bc3-7ab7-418e-8a47-98c95fa8b5a8
relation.isAuthorOfPublication48078809-8159-4180-90c4-6675446d47bc
relation.isAuthorOfPublicationbfc44b0f-a825-4a67-805b-a4a08de214f9
relation.isAuthorOfPublication.latestForDiscovery011c5bc3-7ab7-418e-8a47-98c95fa8b5a8

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