Akt inhibitor-IV in estrogen receptor-positive breast cancer cells: cytotoxic, apoptotic, transcriptional, and in-silico comparison with tamoxifen
| dc.contributor.author | Karakuş, Ahmet | |
| dc.contributor.author | Erdoğan, Orhan | |
| dc.contributor.author | Karakuş, Ahmet | |
| dc.contributor.other | Fen Fakültesi, Biyoteknoloji Bölümü | |
| dc.date.accessioned | 2026-09-25T07:34:08Z | |
| dc.date.created | 2026 | |
| dc.date.issued | 2026 | |
| dc.department | Fakülteler, Fen Fakültesi, Biyoteknoloji Bölümü | |
| dc.description.abstract | Dysregulation of the phosphoinositide 3-kinase/protein kinase B (AKT)/mechanistic target of rapamycin pathway is a hallmark of breast cancer, making AKT a focus of therapeutic interest. AKT inhibitor-IV is a benzimidazolium compound that inhibits AKT phosphorylation, but its activity and binding mechanism in breast cancer cells have not been characterized in detail. We compared AKT inhibitor-IV with tamoxifen in MCF-7 cells. Cell viability after 24-h treatment was measured by 3-[4, 5-dimethylthiazol-2-yl]-2, 5 diphenyl tetrazolium bromide assay (AKT inhibitor-IV: 0.1–5 μM; tamoxifen: 5–50 μM); apoptotic death was quantified by nucleosome ELISA; and AKT1, BCL-2, BAX, and CASP3 mRNA levels were measured by quantitative real-time PCR. Both compounds were docked into the ATP-binding pockets of 3-phosphoinositide-dependent protein kinase-1 (PDK1) (PDB 1H1W) and AKT1 (PDB 3MVH) using AutoDock Vina v1.2.6. AKT inhibitor-IV reduced viability with an IC50 of 1.1 μM, compared with 5.2 μM for tamoxifen, and induced 5.9-fold apoptosis enrichment versus 3.65-fold for tamoxifen. AKT inhibitor-IV downregulated AKT1 (0.32-fold) and BCL-2 (0.55-fold) and upregulated BAX (5.97-fold) and CASP3 (6.43-fold) mRNA; tamoxifen showed qualitatively similar but quantitatively weaker transcriptional changes. Docking returned affinities of −9.91 kcal/mol for PDK1 and −9.66 kcal/mol for AKT1, with AKT inhibitor-IV contacting catalytic-core residues of both kinases. AKT inhibitor-IV was more potent than tamoxifen in this in-vitro setting and warrants further preclinical evaluation. Because MCF-7 cells carry the CASP3 exon 3 deletion and lack functional caspase-3 protein, the observed CASP3 mRNA upregulation reflects transcriptional reprogramming rather than restored executioner activity. The modest docking difference requires biochemical confirmation before any PDK1-versus-AKT1 selectivity claim can be established. | |
| dc.identifier.citation | Karakuş, A., & Erdoğan, O. (2026). Akt inhibitor-IV in estrogen receptor-positive breast cancer cells: cytotoxic, apoptotic, transcriptional, and in-silico comparison with tamoxifenAnti-Cancer Drugs https://doi.org/10.1097/CAD.0000000000001834 | |
| dc.identifier.doi | 10.1097/CAD.0000000000001834 | |
| dc.identifier.issn | 0959-4973 | |
| dc.identifier.orcid | https://orcid.org/0000-0003-1458-808X | |
| dc.identifier.pmid | 42390376 | |
| dc.identifier.scopus | 2-s2.0-105048782923 | |
| dc.identifier.scopusquality | Q2 | |
| dc.identifier.uri | https://doi.org/10.1097/CAD.0000000000001834 | |
| dc.identifier.uri | https://hdl.handle.net/11772/28044 | |
| dc.indekslendigikaynak | Scopus | |
| dc.indekslendigikaynak | PubMed | |
| dc.language.iso | en | |
| dc.publisher | Lippincott Williams and Wilkins | |
| dc.relation.ispartof | Anti-Cancer Drugs | |
| dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | |
| dc.relation.sdg | Goal-03: Good Health and Well-Being | |
| dc.rights | info:eu-repo/semantics/openAccess | |
| dc.subject | AKT inhibitor-IV | |
| dc.subject | Apoptosis | |
| dc.subject | Breast cancer | |
| dc.subject | Cytotoxicity | |
| dc.subject | Molecular docking | |
| dc.subject | Phosphoinositide 3-kinase/protein kinase B/mechanistic target of rapamycin pathway | |
| dc.subject | Tamoxifen | |
| dc.subject | AKT inhibitörü-IV | |
| dc.subject | Apoptoz | |
| dc.subject | Meme kanseri | |
| dc.subject | Sitotoksisite | |
| dc.subject | Moleküler kenetlenme | |
| dc.subject | Fosfoinozitid 3-kinaz/protein kinaz B/rapamisinin mekanistik hedefi yolağı | |
| dc.subject | Tamoksifen | |
| dc.title | Akt inhibitor-IV in estrogen receptor-positive breast cancer cells: cytotoxic, apoptotic, transcriptional, and in-silico comparison with tamoxifen | |
| dc.type | Article | |
| dspace.entity.type | Publication | |
| relation.isAuthorOfPublication | b953de7f-9d9a-40f9-a0bb-99caa8d38af2 | |
| relation.isAuthorOfPublication.latestForDiscovery | b953de7f-9d9a-40f9-a0bb-99caa8d38af2 | |
| relation.isOrgUnitOfPublication | 26d2cfa4-ade2-42cc-bd0e-b1e2292e2b42 | |
| relation.isOrgUnitOfPublication.latestForDiscovery | 26d2cfa4-ade2-42cc-bd0e-b1e2292e2b42 |
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