Flow measurement in microfluidic chips through optical trapping and deep learning

dc.contributor.authorInacio, Nicolas
dc.contributor.authorGerena, Edison
dc.contributor.authorSadak, Ferhat
dc.contributor.authorHaliyo, Sinan
dc.contributor.authorSadak, Ferhat
dc.contributor.otherMühendislik Mimarlık ve Tasarım Fakültesi, Makine Mühendisliği Bölümü
dc.date.accessioned2026-04-24T10:59:01Z
dc.date.created2024
dc.date.issued2024
dc.departmentFakülteler, Mühendislik Mimarlık ve Tasarım Fakültesi, Makine Mühendisliği Bölümü
dc.description.abstractMechanobiology is an emerging multidisciplinary field that involves the study of the mechanisms by which biological organisms sense and respond to mechanical stimuli. In recent years, this field has seen significant advancements through the application of microfluidics and optical manipulation. Microfluidics enables precise control of channel content and flow with great precision, while optical trapping allow for manipulation of microscopic objects. Combining these disciplines offers new opportunities for studying biological phenomena with reduced scale experiments. However, challenges remain in coordinating microfluidics with optical manipulation within confined spaces, in particular when working with biological entities. To address these limitations, an integrated approach is proposed, using 3D optical manipulation setup, microfluidics and deep learning image recognition to estimate forces experienced by optically trapped objects. By analyzing the bead’s displacement within the flow, forces are quantified using a deep learning algorithm. Experimental results demonstrate force variations based on the position within the chip, revealing the potential for improved understanding of biological mechanisms through characterization of local forces. This study facilitates the establishment of optofluidics manipulations, paving the way for future explorations in mechanobiology. © The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2024.
dc.identifier.citationInacio, N., Gerena, E., Sadak, F., & Haliyo, S. (2024). Flow measurement in microfluidic chips through optical trapping and deep learning. Journal of Micro and Bio Robotics, 20, Article 8. doi:10.1007/s12213-024-00173-0
dc.identifier.doi10.1007/s12213-024-00173-0
dc.identifier.issue2
dc.identifier.orcid0009-0007-1865-1652
dc.identifier.orcid0000-0002-1085-219X
dc.identifier.orcid0000-0003-2391-4836
dc.identifier.orcid0000-0003-4587-381X
dc.identifier.scopus2-s2.0-85198064155
dc.identifier.scopusqualityQ4
dc.identifier.uri2194-6418
dc.identifier.urihttps://hdl.handle.net/11772/27088
dc.identifier.volume20
dc.identifier.wosWOS:001266309100001
dc.identifier.wosqualityQ3
dc.indekslendigikaynakScopus
dc.indekslendigikaynakWeb of Science
dc.language.isoen
dc.relation.ispartofJournal of Micro and Bio Robotics
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectMicrofluidics
dc.subjectOptical tweezers
dc.subjectOptofluidics
dc.subjectDeep learning
dc.subjectForce estimation
dc.subjectMicroscopic manipulation
dc.subjectMikroakışkanlar
dc.subjectOptik cımbızlar
dc.subjectOptoakışkanlar
dc.subjectDerin öğrenme
dc.subjectKuvvet tahmini
dc.subjectMikroskobik manipülasyon
dc.titleFlow measurement in microfluidic chips through optical trapping and deep learning
dc.typeArticle
dspace.entity.typePublication
relation.isAuthorOfPublication45e0df8e-2afd-435b-995e-4f8e38ddd085
relation.isAuthorOfPublication.latestForDiscovery45e0df8e-2afd-435b-995e-4f8e38ddd085
relation.isOrgUnitOfPublication1fafeab1-7167-4dc9-8dba-d80f6004d989
relation.isOrgUnitOfPublication.latestForDiscovery1fafeab1-7167-4dc9-8dba-d80f6004d989

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